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microarray gene expression data  (Agilent technologies)


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    Agilent technologies microarray gene expression data
    Microarray Gene Expression Data, supplied by Agilent technologies, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/microarray+gene+expression+data/pm38924548-289-1-0
    Average 90 stars, based on 1 article reviews
    microarray gene expression data - by Bioz Stars, 2026-11
    90/100 stars

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    Related Articles

    Microarray:

    Article Title: The E3 ubiquitin ligase TRIP12 is required for pancreatic acinar cell plasticity and pancreatic carcinogenesis.
    Article Snippet: .. Agilent microarray gene expression data are publicly available in the Gene Expression Omnibus (GEO) repository (GSE147717 and GSE147549): https://www.ncbi. nlm.nih.gov/geo/query/acc.cgi?acc=GSE147717; https:// www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE147 549 RNA-seq data are publicly available in the GEO repository (GSE221587): https://www.ncbi.nlm.nih.gov/ geo/query/acc.cgi?acc=GSE221587. ..

    Article Title: Mitochondrial-nuclear epistasis underlying phenotypic variation in breast cancer pathology
    Article Snippet: .. Of the 286 TCGA patients, 130 had Agilent microarray gene expression data in the U.S. National Institutes of Health National Cancer Institute Genomic Data Commons legacy archive. ..

    Article Title: Tissue-specific isoform switch and DNA hypomethylation of the pyruvate kinase PKM gene in human cancers
    Article Snippet: .. Level 3 RNA-SeqV2 data (containing data on gene, isoform, exon, and junction levels), level 3 exon array FIRMA data, level 3 Agilent microarray gene expression data, level 2 DNA methylation data (Infinium Human Methylation 450), and clinical data for multiple cancers were The Cancer Genome Atlas (TCGA) data portal ( https://tcga-data.nci.nih.gov/tcga/dataAccessMatrix.htm ) ..

    Article Title: Comparison of triple-negative breast cancer molecular subtyping using RNA from matched fresh-frozen versus formalin-fixed paraffin-embedded tissue
    Article Snippet: .. RNA-seq and Agilent microarray gene expression data for TCGA breast cancer (BRCA) study were obtained from the Broad GDAC Firehose ( http://gdac.broadinstitute.org /). .. Gene level 3 RSEM mRNA (stddata__2016_01_28 run) and lowess normalized Agilent microarray expression (stddata__2016_01_28 run) were downloaded and overlapping TNBC samples were identified by common participant barcode (TCGA-XX-XXX).

    Article Title: HERC3-Mediated SMAD7 Ubiquitination Degradation Promotes Autophagy-Induced EMT and Chemoresistance in Glioblastoma
    Article Snippet: Purpose: Glioblastoma, a common malignant intracranial tumor, has the most dismal prognosis.. Autophagy was reported to act as a survival-promoting mechanism in gliomas by inducing epithelial-to-mesenchymal transition (EMT).. Here, we determined the critical molecules involved in autophagy-induced EMT and elucidated the possible mechanism of chemoradiotherapy resistance and tumor recurrence.

    Gene Expression:

    Article Title: The E3 ubiquitin ligase TRIP12 is required for pancreatic acinar cell plasticity and pancreatic carcinogenesis.
    Article Snippet: .. Agilent microarray gene expression data are publicly available in the Gene Expression Omnibus (GEO) repository (GSE147717 and GSE147549): https://www.ncbi. nlm.nih.gov/geo/query/acc.cgi?acc=GSE147717; https:// www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE147 549 RNA-seq data are publicly available in the GEO repository (GSE221587): https://www.ncbi.nlm.nih.gov/ geo/query/acc.cgi?acc=GSE221587. ..

    Article Title: Mitochondrial-nuclear epistasis underlying phenotypic variation in breast cancer pathology
    Article Snippet: .. Of the 286 TCGA patients, 130 had Agilent microarray gene expression data in the U.S. National Institutes of Health National Cancer Institute Genomic Data Commons legacy archive. ..

    Article Title: Tissue-specific isoform switch and DNA hypomethylation of the pyruvate kinase PKM gene in human cancers
    Article Snippet: .. Level 3 RNA-SeqV2 data (containing data on gene, isoform, exon, and junction levels), level 3 exon array FIRMA data, level 3 Agilent microarray gene expression data, level 2 DNA methylation data (Infinium Human Methylation 450), and clinical data for multiple cancers were The Cancer Genome Atlas (TCGA) data portal ( https://tcga-data.nci.nih.gov/tcga/dataAccessMatrix.htm ) ..

    Article Title: Comparison of triple-negative breast cancer molecular subtyping using RNA from matched fresh-frozen versus formalin-fixed paraffin-embedded tissue
    Article Snippet: .. RNA-seq and Agilent microarray gene expression data for TCGA breast cancer (BRCA) study were obtained from the Broad GDAC Firehose ( http://gdac.broadinstitute.org /). .. Gene level 3 RSEM mRNA (stddata__2016_01_28 run) and lowess normalized Agilent microarray expression (stddata__2016_01_28 run) were downloaded and overlapping TNBC samples were identified by common participant barcode (TCGA-XX-XXX).

    Article Title: HERC3-Mediated SMAD7 Ubiquitination Degradation Promotes Autophagy-Induced EMT and Chemoresistance in Glioblastoma
    Article Snippet: Purpose: Glioblastoma, a common malignant intracranial tumor, has the most dismal prognosis.. Autophagy was reported to act as a survival-promoting mechanism in gliomas by inducing epithelial-to-mesenchymal transition (EMT).. Here, we determined the critical molecules involved in autophagy-induced EMT and elucidated the possible mechanism of chemoradiotherapy resistance and tumor recurrence.

    RNA Sequencing:

    Article Title: The E3 ubiquitin ligase TRIP12 is required for pancreatic acinar cell plasticity and pancreatic carcinogenesis.
    Article Snippet: .. Agilent microarray gene expression data are publicly available in the Gene Expression Omnibus (GEO) repository (GSE147717 and GSE147549): https://www.ncbi. nlm.nih.gov/geo/query/acc.cgi?acc=GSE147717; https:// www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE147 549 RNA-seq data are publicly available in the GEO repository (GSE221587): https://www.ncbi.nlm.nih.gov/ geo/query/acc.cgi?acc=GSE221587. ..

    Article Title: Comparison of triple-negative breast cancer molecular subtyping using RNA from matched fresh-frozen versus formalin-fixed paraffin-embedded tissue
    Article Snippet: .. RNA-seq and Agilent microarray gene expression data for TCGA breast cancer (BRCA) study were obtained from the Broad GDAC Firehose ( http://gdac.broadinstitute.org /). .. Gene level 3 RSEM mRNA (stddata__2016_01_28 run) and lowess normalized Agilent microarray expression (stddata__2016_01_28 run) were downloaded and overlapping TNBC samples were identified by common participant barcode (TCGA-XX-XXX).

    DNA Methylation Assay:

    Article Title: Tissue-specific isoform switch and DNA hypomethylation of the pyruvate kinase PKM gene in human cancers
    Article Snippet: .. Level 3 RNA-SeqV2 data (containing data on gene, isoform, exon, and junction levels), level 3 exon array FIRMA data, level 3 Agilent microarray gene expression data, level 2 DNA methylation data (Infinium Human Methylation 450), and clinical data for multiple cancers were The Cancer Genome Atlas (TCGA) data portal ( https://tcga-data.nci.nih.gov/tcga/dataAccessMatrix.htm ) ..

    Methylation:

    Article Title: Tissue-specific isoform switch and DNA hypomethylation of the pyruvate kinase PKM gene in human cancers
    Article Snippet: .. Level 3 RNA-SeqV2 data (containing data on gene, isoform, exon, and junction levels), level 3 exon array FIRMA data, level 3 Agilent microarray gene expression data, level 2 DNA methylation data (Infinium Human Methylation 450), and clinical data for multiple cancers were The Cancer Genome Atlas (TCGA) data portal ( https://tcga-data.nci.nih.gov/tcga/dataAccessMatrix.htm ) ..



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